ihounie/singularity2:latest

$ singularity pull shub://ihounie/singularity2:latest

Singularity Recipe

BootStrap: docker
From: ubuntu:16.04

%help
    This container runs R.

%labels
    Maintainer Matthew Flister
    R_Version 3.6.0

%apprun R
    exec R "${@}"

%apprun Rscript
    exec Rscript "${@}"

%runscript
    exec Rscript "${@}"

%post
    mkdir -p /scratch/global /scratch/local /rcc/stor1/refdata /rcc/stor1/projects /rcc/stor1/depts /extR/library1 /extR/library2
    apt-get update
    apt-get -y install \
        wget \
        build-essential \
        software-properties-common \
        apt-transport-https \
        locales
    echo "LC_ALL=en_US.UTF-8" >> /etc/environment
    echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen
    echo "LANG=en_US.UTF-8" > /etc/locale.conf
    locale-gen en_US.UTF-8
    echo 'deb https://cloud.r-project.org/bin/linux/ubuntu xenial-cran35/' >> /etc/apt/sources.list
    apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9
    apt-get update
    apt-get -y install --allow-unauthenticated --no-install-recommends \
        r-base=${R_VERSION}* \
        r-base-core=${R_VERSION}* \
        r-base-dev=${R_VERSION}* \
        r-recommended=${R_VERSION}* \
        r-base-html=${R_VERSION}* \
        r-doc-html=${R_VERSION}*
    apt-get clean
    rm -rf /var/lib/apt/lists/*

    echo "options(repos = c(CRAN = 'https://cloud.r-project.org/'), download.file.method = 'libcurl')" >> /usr/lib/R/etc/Rprofile.site

Collection


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Metrics

key value
id /containers/ihounie-singularity2-latest
collection name ihounie/singularity2
branch master
tag latest
commit 81846fd231187c8f23eb897cd6fbd69c68a05fd3
version (container hash) 3cac7d80423dcd89e8b27826b524306e
build date 2020-04-23T17:31:48.672Z
size (MB) 610.0
size (bytes) 242327583
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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