iferres/Singularity_recipes:pirate

$ singularity pull shub://iferres/Singularity_recipes:pirate

Singularity Recipe

Bootstrap: docker
From: ubuntu:16.04

%post 
	apt update && apt upgrade -y
	apt install -y wget bzip2
	apt clean -y
	#install conda 
	wget https://repo.continuum.io/miniconda/Miniconda2-4.5.12-Linux-x86_64.sh -O /opt/miniconda.sh
	bash /opt/miniconda.sh -b -p /opt/miniconda
	export PATH="/opt/miniconda/bin:$PATH"
	conda config --add channels conda-forge
	conda config --add channels bioconda
	conda install --yes -c sionbayliss pirate=prerelease
	conda clean --all --yes

%environment
	export PATH="/opt/miniconda/bin:$PATH"


%runscript
	PIRATE "$@"

%labels 
	author Ignacio Ferres

Collection


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Metrics

key value
id /containers/iferres-Singularity_recipes-pirate
collection name iferres/Singularity_recipes
branch master
tag pirate
commit 8fc6b3a2e5f326003230e6341e527eb699cab521
version (container hash) ac7b35bb79506de66a3f06e3a3acb5d7
build date 2019-10-18T09:41:01.623Z
size (MB) 2267
size (bytes) 743755807
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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