iferres/Singularity_recipes:panoct

$ singularity pull shub://iferres/Singularity_recipes:panoct

Singularity Recipe

Bootstrap: docker
From: ubuntu:16.04

%post 
	apt update && apt upgrade -y
	apt install -y wget bzip2 git
	apt clean -y
	#install conda 
	wget https://repo.continuum.io/miniconda/Miniconda2-4.5.12-Linux-x86_64.sh -O /opt/miniconda.sh
	bash /opt/miniconda.sh -b -p /opt/miniconda
	export PATH="/opt/miniconda/bin:$PATH"
	conda config --add channels bioconda
	conda install --yes panoct=3.23

%runscript
	panoct.pl "$@"

%environment
        export PATH="/opt/miniconda/bin:$PATH"

%labels
	author Ignacio Ferres

Collection


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Metrics

key value
id /containers/iferres-Singularity_recipes-panoct
collection name iferres/Singularity_recipes
branch master
tag panoct
commit 92f333e5574a67d7f8e20b7f9aa96281e508fe39
version (container hash) 99b7c92f96bde9294fb90433a085b92f
build date 2019-10-18T09:45:41.325Z
size (MB) 690
size (bytes) 293097503
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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