iferres/Singularity_recipes:pandelos
$ singularity pull shub://iferres/Singularity_recipes:pandelos
Singularity Recipe
Bootstrap: docker
From: ubuntu:18.04
%post
apt update && apt upgrade -y
apt install -y git python3 python3-pip efetch default-jdk
apt clean -y
pip3 install biopython networkx
git clone https://github.com/InfOmics/PanDelos
cd PanDelos
git checkout 5f296701b1832f9a794c657f3221f4bcd2287f76
%environment
export PANDELOS_PATH='/PanDelos'
%runscript
bash /PanDelos/pandelos.sh
%labels
author Ignacio Ferres
Collection
- Name: iferres/Singularity_recipes
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/iferres-Singularity_recipes-pandelos |
collection name | iferres/Singularity_recipes |
branch | master |
tag | pandelos |
commit | 92f333e5574a67d7f8e20b7f9aa96281e508fe39 |
version (container hash) | d7e3f83878d61821af347534afa27cc5 |
build date | 2019-10-18T09:43:08.126Z |
size (MB) | 1103 |
size (bytes) | 467333151 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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