hexmek/container:spades_3.15

$ singularity pull shub://hexmek/container:spades_3.15

Singularity Recipe

Bootstrap: debootstrap
OSVersion: stable
MirrorURL: http://httpredir.debian.org/debian


%post
    apt update
    apt upgrade -y
    apt install -y make cmake g++ wget curl \
    procps \
    python3 \
    procps  python3-pip \
    python3-dev build-essential wget bzip2 libz-dev
    update-alternatives --install /usr/bin/python python $(which python3) 1

    cd /opt
    wget -O spades.tar.gz http://cab.spbu.ru/files/release3.15.1/SPAdes-3.15.1-Linux.tar.gz
    tar xzvf spades.tar.gz
    

%environment
    export LC_ALL=C     
    export PATH="/opt/SPAdes-3.15.1-Linux/bin:$PATH"

Collection


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Metrics

key value
id /containers/hexmek-container-spades_3.15
collection name hexmek/container
branch master
tag spades_3.15
commit bbe9ff3bde8c5095f49ac51f4208bec71994fc74
version (container hash) e01da4a2ccd9e4fe5b5b20cb902117acd2ae068a013b85448daff59a1fbcee14
build date 2021-02-22T12:15:41.552Z
size (MB) 359.9765625
size (bytes) 377462784
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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