hexmek/container:drep3

$ singularity pull shub://hexmek/container:drep3

Singularity Recipe

Bootstrap: docker
From: conda/miniconda3

%post
    apt update
    apt upgrade -y
    apt install -y python3 python3-pip libgl1-mesa-glx rsync git curl wget bwa \
                   bedtools samtools procps parallel

     conda install -c conda-forge -c bioconda "drep>=3.0" "fastani>=1.32"


%environment
    export LC_ALL=C

Collection


View on Datalad

Metrics

key value
id /containers/hexmek-container-drep3
collection name hexmek/container
branch master
tag drep3
commit 09a0aca23d1f7638eca03aa20a4603d6afe56b0c
version (container hash) 32902828d465f7e35e195f26dc20f6bf66aed73ee16024d2e193bca6a93e6367
build date 2021-03-09T07:55:30.757Z
size (MB) 814.046875
size (bytes) 853590016
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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