hexmek/container:dbcan
$ singularity pull shub://hexmek/container:dbcan
Singularity Recipe
Bootstrap: docker
From: conda/miniconda3
%post
apt update
apt upgrade -y
apt install -y python3 python3-pip libgl1-mesa-glx rsync git curl wget bwa \
bedtools samtools procps parallel
pip install run-dbcan==2.0.11
conda install python=3.8 diamond hmmer prodigal -c conda-forge -c bioconda
%environment
export LC_ALL=C
Collection
- Name: hexmek/container
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/hexmek-container-dbcan |
collection name | hexmek/container |
branch | master |
tag | dbcan |
commit | 14a17f97b453494dcf6407b91263d2ac187d09b3 |
version (container hash) | 499129e909be14a94bbe61570d84bb480f3476b518a24b94e879eb7e0d31e1aa |
build date | 2021-03-16T11:16:09.581Z |
size (MB) | 614.6015625 |
size (bytes) | 644456448 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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