hexmek/container:dbcan

$ singularity pull shub://hexmek/container:dbcan

Singularity Recipe

Bootstrap: docker
From: conda/miniconda3

%post
    apt update
    apt upgrade -y
    apt install -y python3 python3-pip libgl1-mesa-glx rsync git curl wget bwa \
                   bedtools samtools procps parallel


    pip install run-dbcan==2.0.11
    conda install python=3.8 diamond hmmer prodigal -c conda-forge -c bioconda


%environment
    export LC_ALL=C

Collection


View on Datalad

Metrics

key value
id /containers/hexmek-container-dbcan
collection name hexmek/container
branch master
tag dbcan
commit 14a17f97b453494dcf6407b91263d2ac187d09b3
version (container hash) 499129e909be14a94bbe61570d84bb480f3476b518a24b94e879eb7e0d31e1aa
build date 2021-03-16T11:16:09.581Z
size (MB) 614.6015625
size (bytes) 644456448
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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