heinzlab/csrna:latest

$ singularity pull shub://heinzlab/csrna:latest

Singularity Recipe

Bootstrap: docker
From: continuumio/miniconda3

%labels
    MAINTAINER Carlos Guzman <cag104@eng.ucsd.edu>
    DESCRIPTION Container image containing all requirements for the adapted heinzlab/csrna
    VERSION 0.1dev (Updated: 11/9/18)

%files
    environment.yml /

%environment
	PATH=/opt/conda/envs/csrna-0.1dev/bin:$PATH
	export PATH

%post
    apt-get -y update
    apt-get -y install build-essential libboost-all-dev libgsl-dev libz-dev

    /opt/conda/bin/conda env create -f /environment.yml
    /opt/conda/bin/conda clean -a

    git clone https://github.com/rnakato/SSP.git
    cd SSP
    make
    mv bin/ssp /opt/conda/envs/csrna-0.1dev/bin

Collection


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Metrics

key value
id /containers/heinzlab-csrna-latest
collection name heinzlab/csrna
branch master
tag latest
commit fd54a7dc3bd748ab4c1d39e941326d1236ba1929
version (container hash) c826a1016cb292f848f8d78f442509e5
build date 2018-11-11T00:03:06.740Z
size (MB) 3740
size (bytes) 1254473759
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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