heinzlab/csrna:latest
$ singularity pull shub://heinzlab/csrna:latest
Singularity Recipe
Bootstrap: docker
From: continuumio/miniconda3
%labels
MAINTAINER Carlos Guzman <cag104@eng.ucsd.edu>
DESCRIPTION Container image containing all requirements for the adapted heinzlab/csrna
VERSION 0.1dev (Updated: 11/9/18)
%files
environment.yml /
%environment
PATH=/opt/conda/envs/csrna-0.1dev/bin:$PATH
export PATH
%post
apt-get -y update
apt-get -y install build-essential libboost-all-dev libgsl-dev libz-dev
/opt/conda/bin/conda env create -f /environment.yml
/opt/conda/bin/conda clean -a
git clone https://github.com/rnakato/SSP.git
cd SSP
make
mv bin/ssp /opt/conda/envs/csrna-0.1dev/bin
Collection
- Name: heinzlab/csrna
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/heinzlab-csrna-latest |
collection name | heinzlab/csrna |
branch | master |
tag | latest |
commit | fd54a7dc3bd748ab4c1d39e941326d1236ba1929 |
version (container hash) | c826a1016cb292f848f8d78f442509e5 |
build date | 2018-11-11T00:03:06.740Z |
size (MB) | 3740 |
size (bytes) | 1254473759 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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