hansendx/singularity_fsl_minimal:0.1

$ singularity pull shub://hansendx/singularity_fsl_minimal:0.1

Singularity Recipe

Bootstrap: debootstrap
OSVersion: stable
MirrorURL: http://ftp.us.debian.org/debian/

%post

apt-get update
apt-get install gnupg2 wget eatmydata -y 


wget -O- http://neuro.debian.net/lists/stretch.de-md.full | tee /etc/apt/sources.list.d/neurodebian.sources.list

while true; do
	apt-key adv --recv-keys --keyserver hkp://eu.pool.sks-keyservers.net:80 0xA5D32F012649A5A9 || continue
	break
done

# hkp://pool.sks-keyservers.net:80 0xA5D32F012649A5A9

apt-get update 

eatmydata apt-get install fsl-5.0-complete -y

cp /etc/fsl/5.0/fsl.sh /.singularity.d/env/90-environment.sh

#cleanup
apt-get purge gnupg2 wget eatmydata -y
apt-get autoclean -y
apt-get autoremove -y
rm -rf /var/lib/apt/lists/*

Collection

• Name: hansendx/singularity_fsl_minimal
• License: None

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