gearslaboratory/gears-singularity-private:slurm
$ singularity pull shub://gearslaboratory/gears-singularity-private:slurm
Singularity Recipe
BootStrap: debootstrap
OSVersion: xenial
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: bash
### GEARS Lab SLURM submitter for Pronghorn.
%post
locale-gen en_US.UTF-8
sed -i 's/main/main restricted universe/g' /etc/apt/sources.list
echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" | tee -a /etc/apt/sources.list
gpg --keyserver keyserver.ubuntu.com --recv-key E084DAB9
gpg -a --export E084DAB9 | apt-key add -
apt-get update
# Install R, openmpi, misc. utilities:
apt-get install -y libopenblas-dev r-base-core r-base-dev libcurl4-openssl-dev libopenmpi-dev openmpi-bin openmpi-common openmpi-doc openssh-client openssh-server libssh-dev wget vim git nano git cmake gfortran g++ curl wget python autoconf bzip2 libtool libtool-bin libxml2-dev
alias squeue="ssh $USER@$HOSTNAME squeue"
Collection
- Name: gearslaboratory/gears-singularity-private
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/gearslaboratory-gears-singularity-private-slurm |
collection name | gearslaboratory/gears-singularity-private |
branch | master |
tag | slurm |
commit | 889e55f0f93bddc2398dcdbde7213846b71ea4ab |
version (container hash) | 6ec98bea78ff743bb81621a33c914a90 |
build date | 2018-05-23T17:28:03.967Z |
size (MB) | None |
size (bytes) | 601972767 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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