gearslaboratory/gears-singularity-private:slurm

$ singularity pull shub://gearslaboratory/gears-singularity-private:slurm

Singularity Recipe

BootStrap: debootstrap
OSVersion: xenial
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: bash

### GEARS Lab SLURM submitter for Pronghorn.  

%post
  locale-gen en_US.UTF-8
  sed -i 's/main/main restricted universe/g' /etc/apt/sources.list
  echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" | tee -a /etc/apt/sources.list
  gpg --keyserver keyserver.ubuntu.com --recv-key E084DAB9
  gpg -a --export E084DAB9 | apt-key add -
  apt-get update

  # Install R, openmpi, misc. utilities:
  apt-get install -y libopenblas-dev r-base-core r-base-dev libcurl4-openssl-dev libopenmpi-dev openmpi-bin openmpi-common openmpi-doc openssh-client openssh-server libssh-dev wget vim git nano git cmake gfortran g++ curl wget python autoconf bzip2 libtool libtool-bin libxml2-dev 

  alias squeue="ssh $USER@$HOSTNAME squeue"

Collection


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Metrics

key value
id /containers/gearslaboratory-gears-singularity-private-slurm
collection name gearslaboratory/gears-singularity-private
branch master
tag slurm
commit 889e55f0f93bddc2398dcdbde7213846b71ea4ab
version (container hash) 6ec98bea78ff743bb81621a33c914a90
build date 2018-05-23T17:28:03.967Z
size (MB) None
size (bytes) 601972767
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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