fredjaya/rec-bench:hyphy

$ singularity pull shub://fredjaya/rec-bench:hyphy

Singularity Recipe

BootStrap: shub
From: shub://fredjaya/rec-bench:base@digest

%post
    yum -y install scl-utils-build devtoolset-6 git
    scl enable devtoolset-6 bash
    cd /usr/src

    # Add cmake
    wget https://github.com/Kitware/CMake/releases/download/v3.15.0-rc1/cmake-3.15.0-rc1.tar.gz
    tar -zxvf cmake-3.15.0-rc1.tar.gz
    rm -rf cmake-3.15.0-rc1.tar.gz
    cd cmake-3.15.0-rc1
    ./bootstrap
    make
    make install

    # Add hyphy
    cd /usr/src
    git clone https://github.com/veg/hyphy.git
    cd hyphy
    cmake .
    # make executable
    make MP

%environment
    export PATH=/usr/src/hyphy/:$PATH

#%test
#    git --version
#    HYPHYMP

Collection


View on Datalad

Metrics

key value
id /containers/fredjaya-rec-bench-hyphy
collection name fredjaya/rec-bench
branch feature/simg-hyphy
tag hyphy
commit 76fb66f0c101e8d6d0a4e8b36bec58d468e380e5
version (container hash) ce1bea08e2c95b77633cae76454c5d6e
build date 2019-06-27T08:32:44.511Z
size (MB) 1636
size (bytes) 501895199
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.