dynverse/ti_merlot:latest

$ singularity pull shub://dynverse/ti_merlot:latest

Singularity Recipe

#######################################################################################
## DO NOT EDIT THIS FILE! This file was automatically generated from the dockerfile. ##
## Run babelwhale::convert_dockerfile_to_singularityrecipe() to update this file.    ##
#######################################################################################

Bootstrap: shub

From: dynverse/dynwrap:bioc

%labels
    version 0.1.4

%files
    . /code

%post
    chmod -R 755 '/code'
    R -e 'devtools::install_cran("destiny")'
    apt-get update && apt-get install -y libcgal-dev libglu1-mesa-dev libglu1-mesa-dev
    apt-get install -y python3 python3-tk python3-pip
    apt-get install -y python3-scipy python3-numpy python3-pandas
    pip3 install cython
    pip3 install git+https://github.com/soedinglab/csgraph_mod
    apt-get -y install libudunits2-dev
    Rscript -e 'devtools::install_cran("udunits2", configure.args =  c(udunits2 = "--with-udunits2-include=/usr/include/udunits2"))'
    R -e "devtools::install_github('soedinglab/merlot')"

%runscript
    exec Rscript /code/run.R

Collection


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Metrics

key value
id /containers/dynverse-ti_merlot-latest
collection name dynverse/ti_merlot
branch master
tag latest
commit 2d6fb37a5ea75dbd9108d3bc3b0510f910cef19a
version (container hash) c6498723ac0fc6e4c6cf54c894dd9804
build date 2018-10-29T20:59:12.585Z
size (MB) 2717
size (bytes) 1003900959
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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