dynverse/ti_merlot:latest
$ singularity pull shub://dynverse/ti_merlot:latest
Singularity Recipe
#######################################################################################
## DO NOT EDIT THIS FILE! This file was automatically generated from the dockerfile. ##
## Run babelwhale::convert_dockerfile_to_singularityrecipe() to update this file. ##
#######################################################################################
Bootstrap: shub
From: dynverse/dynwrap:bioc
%labels
version 0.1.4
%files
. /code
%post
chmod -R 755 '/code'
R -e 'devtools::install_cran("destiny")'
apt-get update && apt-get install -y libcgal-dev libglu1-mesa-dev libglu1-mesa-dev
apt-get install -y python3 python3-tk python3-pip
apt-get install -y python3-scipy python3-numpy python3-pandas
pip3 install cython
pip3 install git+https://github.com/soedinglab/csgraph_mod
apt-get -y install libudunits2-dev
Rscript -e 'devtools::install_cran("udunits2", configure.args = c(udunits2 = "--with-udunits2-include=/usr/include/udunits2"))'
R -e "devtools::install_github('soedinglab/merlot')"
%runscript
exec Rscript /code/run.R
Collection
- Name: dynverse/ti_merlot
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/dynverse-ti_merlot-latest |
collection name | dynverse/ti_merlot |
branch | master |
tag | latest |
commit | 2d6fb37a5ea75dbd9108d3bc3b0510f910cef19a |
version (container hash) | c6498723ac0fc6e4c6cf54c894dd9804 |
build date | 2018-10-29T20:59:12.585Z |
size (MB) | 2717 |
size (bytes) | 1003900959 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.