dynverse/ti_calista:latest

$ singularity pull shub://dynverse/ti_calista:latest

Singularity Recipe

#######################################################################################
## DO NOT EDIT THIS FILE! This file was automatically generated from the dockerfile. ##
## Run babelwhale::convert_dockerfile_to_singularityrecipe() to update this file.    ##
#######################################################################################

Bootstrap: shub

From: dynverse/dynwrap:bioc

%labels
    version 0.1.7

%files
    . /code

%post
    chmod -R 755 '/code'
    R -e 'devtools::install_cran("destiny")'
    apt-get update && apt-get install -y libcgal-dev libglu1-mesa-dev libglu1-mesa-dev libjpeg-dev libtiff-dev tcl-dev patch
    cd / && \
      git clone https://github.com/CABSEL/CALISTA.git && \
      cd CALISTA && \
      rm -rf .git && \
      find . -type f \( -iname \*.zip -o -iname \*.csv -o -iname \*.txt \) -exec rm {} + && \
      wget https://gist.githubusercontent.com/rcannood/ed97cacc2f373de6f3a6bb7320e2c677/raw/935044855cd204aee6eba821367b95669bb14784/calista.patch && \
      patch -p0 < calista.patch
    Rscript /CALISTA/CALISTA-R/install_packs.R

%runscript
    exec Rscript /code/run.R

Collection


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Metrics

key value
id /containers/dynverse-ti_calista-latest
collection name dynverse/ti_calista
branch master
tag latest
commit 01e0fcab8c09a63a8eaba3c7e9ecf9daaa7e37fc
version (container hash) 6c58d599b03b9f2ad012a46e0c2a12d3
build date 2018-10-29T20:59:12.371Z
size (MB) 2484
size (bytes) 923217951
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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