drewpolasky/vapor_aci:latest
$ singularity pull shub://drewpolasky/vapor_aci:latest
Singularity Recipe
BootStrap: docker
From: centos:7
%setup
%files
%environment
PATH="$PATH:/usr/lib64/openmpi/bin/"
LD_LIBRARY_PATH="$LD_LIBRARY_PATH:/usr/lib64/openmpi/lib/"
MPI_ROOT=/usr/lib64/openmpi/
export PATH
export LD_LIBRARY_PATH
export MPI_ROOT
%runscript
%post
# commands to be executed inside container during bootstrap
# add python and install some packages
yum -y update
yum -y install epel-release \
centos-release-scl
yum -y install vte-devel \
vte291-devel \
vte-profile \
devtoolset-7-gcc* \
devtoolset-8-gcc*
yum -y groups install "Development Tools"
yum -y groups install "Base"
yum -y install git cmake gcc-c++ gcc binutils \
libX11-devel libXpm-devel libXft-devel libXext-devel \
gcc-gfortran openssl-devel pcre-devel \
mesa-libGL-devel mesa-libGLU-devel glew-devel ftgl-devel mysql-devel \
fftw-devel cfitsio-devel graphviz-devel \
avahi-compat-libdns_sd-devel openldap-devel \
libxml2-devel gsl-devel \
cmake3 \
hdf5-devel \
patch \
qt5-qtbase-devel \
qt5-qtsvg-devel \
gcc-g++ numpy eigen3-devel zlib-devel qt-devel libtiff-devel \
bzip2 ca-certificates \
glibc-devel libXext-devel libSM-devel libXrender-devel \
mercurial subversion \
mesa-libGLU-devel.i686 \
mesa-libGL-devel.i686 \
libcanberra-gtk* \
autoconf \
Lmod
yum -y install python27-python-devel python27-pip
# Command below is installing python 3.6.3 while system version is 3.6.8
# yum -y install rh-python36-python-devel rh-python36-python-pip
yum -y update
source /opt/rh/devtoolset-8/enable
mkdir -p /storage/home
mkdir -p /storage/work
mkdir -p /gpfs/scratch
mkdir -p /gpfs/group
mkdir -p /var/spool/torque
# Make symlinks
ln -s `which qmake-qt5` /usr/local/bin/qmake
ln -s `which moc-qt5` /usr/local/bin/moc
ln -s `which rcc-qt5` /usr/local/bin/rcc
ln -s `which vim` /usr/local/bin/vi
ldconfig -n /usr/lib64/openmpi/lib/
cd /opt/
wget https://github.com/NCAR/VAPOR/releases/download/3.1.0/Vapor-3.1.0-CentOS.sh
bash Vapor-3.1.0-CentOS.sh --prefix=/opt/ --skip-license
Collection
- Name: drewpolasky/vapor_aci
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/drewpolasky-vapor_aci-latest |
collection name | drewpolasky/vapor_aci |
branch | master |
tag | latest |
commit | ad719b37e48b08614a00ada2f3d129317356ae6c |
version (container hash) | 0ee8381830b05f8330c4e744592837f2 |
build date | 2019-09-24T13:24:27.586Z |
size (MB) | 3209.0 |
size (bytes) | 1386086431 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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