dominik-handler/AP_singu:racon

$ singularity pull shub://dominik-handler/AP_singu:racon

Singularity Recipe

#Racon in singularity

Bootstrap: docker
From: ubuntu:16.04

%labels
  maintainer Dominik Handler <Dominik Handler@imba.oeaw.ac.at>
  racon v1.4.3 (871c8de)

%runscript
    racon "$@"

%post
    apt-get update
    apt-get -y install wget

     apt-get update
     apt-get -y install software-properties-common
     add-apt-repository universe
     apt-get update


     apt-get update
     apt-get -y install build-essential cmake
     apt-get -y install zlib1g-dev
    # apt-get -y install mummer     
    # apt-get -y install python-numpy  
    # apt-get -y install python-matplotlib      
     apt-get -y install git-core   

    cd / 
    git clone --recursive https://github.com/isovic/racon.git racon
    cd racon
    mkdir build
    cd build
    cmake -DCMAKE_BUILD_TYPE=Release -Dracon_build_wrapper=ON ..
    make install

    apt-get autoremove
    
%test
    racon -h

Collection

• Name: dominik-handler/AP_singu
• License: None

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