dominik-handler/AP_singu:ngmlr
$ singularity pull shub://dominik-handler/AP_singu:ngmlr
Singularity Recipe
#ngmlr in singularity
BootStrap: debootstrap
OSVersion: xenial
MirrorURL: http://us.archive.ubuntu.com/ubuntu/
%runscript
/ngmlr/bin/ngmlr-*/ngmlr "$@"
%post
apt-get --assume-yes install wget
apt-get --assume-yes install sudo
sudo apt-get update
sudo apt-get --assume-yes install build-essential
sudo apt-get --assume-yes install zlib1g
sudo apt-get --assume-yes install cmake
sudo apt-get update
sudo apt-get --assume-yes install git-core
sudo apt-get --assume-yes install zlib1g-dev
cd /
git clone https://github.com/philres/ngmlr.git
cd ngmlr/
mkdir -p build
cd build/
cmake ..
make
cd ../bin/ngmlr-*/
sudo mkdir /groups
sudo mkdir /clustertmp
%test
/ngmlr/bin/ngmlr-*/ngmlr -h
Collection
- Name: dominik-handler/AP_singu
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/dominik-handler-AP_singu-ngmlr |
collection name | dominik-handler/AP_singu |
branch | master |
tag | ngmlr |
commit | fad2f9686182d0f4360ef6feef654d8326800612 |
version (container hash) | 8664ef69ded501fb18f90ecbf1f808cb |
build date | 2020-01-30T14:23:06.134Z |
size (MB) | 604 |
size (bytes) | 309137439 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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