dominik-handler/AP_singu:helen

$ singularity pull shub://dominik-handler/AP_singu:helen

Singularity Recipe

Bootstrap: library
From: ubuntu:18.04

#@ Bootstrap: docker
#@ From: pytorch/pytorch:1.1.0-cuda10.0-cudnn7.5-runtime

%labels
  maintainer Dominik Handler <Dominik Handler@imba.oeaw.ac.at  
  MarginPolish 

%post
    set -e 

    apt-get update 
    apt-get -y install software-properties-common
    add-apt-repository universe
    apt-get update
    apt-get -y install time git cmake make wget autoconf gcc g++ zlib1g-dev libcurl4-openssl-dev libbz2-dev python3 python3-dev python3-pip python3-virtualenv virtualenv bzip2 lzma-dev liblzma-dev libpthread-stubs0-dev libhdf5-dev
    apt-get clean && \
    apt-get purge && \
    #@ rm --no-preserve-root -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*


    #@ cd /tmp
    #@ mkdir /opt/cmake && \
    #@ wget https://github.com/Kitware/CMake/releases/download/v3.14.4/cmake-3.14.4-Linux-x86_64.sh && \
    #@ sh /tmp/cmake-3.14.4-Linux-x86_64.sh --prefix=/opt/cmake --skip-license && \
    #@ ln -s /opt/cmake/bin/cmake /usr/local/bin/cmake

    cd /
    git clone https://github.com/kishwarshafin/helen.git && \
    cd /helen && \
    make install

    #@ mkdir /opt/helen/build
    #@ cd /opt/helen/build
    #@ cmake .. -Wno-deprecated && make

    #@ python3 -m pip install h5py tqdm numpy pyyaml
    #python3 -m pip install https://download.pytorch.org/whl/cpu/torch-1.1.0-cp36-cp36m-linux_x86_64.whl
    #python3 -m pip install https://download.pytorch.org/whl/cpu/torchvision-0.3.0-cp36-cp36m-linux_x86_64.whl

    #cd /opt/helen
    #cp helen_wrapper.sh /opt/helen_wrapper.sh

%environment
    . /helen/venv/bin/activate

%runscript
    $@

Collection

• Name: dominik-handler/AP_singu
• License: None

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