darachm/singularity_runningJobs:v0.3.0

$ singularity pull shub://darachm/singularity_runningJobs:v0.3.0

Singularity Recipe

Bootstrap: docker
From: ubuntu:bionic-20190307

%labels
MAINTAINER darachm
DATE 190410

%help

    This is a base for running things, general stuff.
    It includes nextflow
    
%post

    apt-get -y update
    apt-get -y upgrade
# to install nextflow
    apt-get -y install default-jdk graphviz curl 
# to install singularity
    apt-get -y install singularity-container
# general stuff
    apt-get -y install gzip git wget g++ gcc-4.8 gawk
# for additional repos
    apt-get -y install gnupg2 software-properties-common 
# perl ! Some times you just need a one-liner
    apt-get -y install perl

    cd / 
    curl -s https://get.nextflow.io | bash
    chmod a+rx /nextflow

%test

    # ?

Collection


View on Datalad

Metrics

key value
id /containers/darachm-singularity_runningJobs-v0.3.0
collection name darachm/singularity_runningJobs
branch master
tag v0.3.0
commit d69ee41efed4383e296bd84d46d1ebe899686247
version (container hash) 82e66fd1b59db835ae496fcd21077ee0
build date 2019-12-18T01:15:49.502Z
size (MB) 1096
size (bytes) 531288095
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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