darachm/singularity_runningJobs:latest
$ singularity pull shub://darachm/singularity_runningJobs:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:bionic-20190307
%labels
MAINTAINER darachm
DATE 190410
%help
This is a base for running things, general stuff.
It includes nextflow
%post
apt-get -y update
apt-get -y upgrade
# to install nextflow
apt-get -y install default-jdk graphviz curl
# to install singularity
apt-get -y install singularity-container
# general stuff
apt-get -y install gzip git wget g++ gcc-4.8 gawk
# for additional repos
apt-get -y install gnupg2 software-properties-common
# perl ! Some times you just need a one-liner
apt-get -y install perl
cd /
curl -s https://get.nextflow.io | bash
chmod a+rx /nextflow
%test
# ?
Collection
- Name: darachm/singularity_runningJobs
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/darachm-singularity_runningJobs-latest |
collection name | darachm/singularity_runningJobs |
branch | master |
tag | latest |
commit | d69ee41efed4383e296bd84d46d1ebe899686247 |
version (container hash) | d8a7adfa96daf38c5539d0f899812973 |
build date | 2019-12-10T18:02:11.006Z |
size (MB) | 1096 |
size (bytes) | 531288095 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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