coreyjadams/larcv2-singularity:centos7-cpu-torch-mpi
$ singularity pull shub://coreyjadams/larcv2-singularity:centos7-cpu-torch-mpi
Singularity Recipe
Bootstrap: shub
From: coreyjadams/larcv2-singularity:centos7-cpu-torch
#Bootstrap: localimage
#From: /home/cadams/DeepLearnPhysics/larcv2-singularity/centos7-cpu-torch1.0rc
%help
Centos7 with torch1.0rc, horovod, mpich, SCN
ML/DL packages : torch sc-learn
Sci. packages : numpy pandas sc-image matplotlib opencv-python
Basic python : ipython jupyter yaml pygments six zmq wheel h5py tqdm mpi4py horovod
Development kit : g++/gcc cython libqt4-dev python-dev
Utility kit : git wget emacs vim openssh-client mpich
To start your container simply try
singularity exec THIS_CONTAINER.simg bash
%labels
Maintainer coreyjadams
Version centos7-cpu-torch1.0rc-mpich3.2.1
#------------
# Global installation
#------------
%environment
# for MPICH:
export PATH=/usr/local/mpich/install/bin/:${PATH}
export LD_LIBRARY_PATH=/usr/local/mpich/install/lib/:${LD_LIBRARY_PATH}
%post
# install MPICH
wget -q http://www.mpich.org/static/downloads/3.2.1/mpich-3.2.1.tar.gz
tar xf mpich-3.2.1.tar.gz
rm mpich-3.2.1.tar.gz
cd mpich-3.2.1
# disable the addition of the RPATH to compiled executables
# this allows us to override the MPI libraries to use those
# found via LD_LIBRARY_PATH
./configure --prefix=/usr/local/mpich/install --disable-wrapper-rpath
make -j 4 install
# add to local environment to build pi.c
export PATH=$PATH:/usr/local/mpich//install/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/mpich//install/lib
env | sort
cd ..
rm -rf mpich-3.2.1
# Add mpi4py and horovod:
pip --no-cache-dir --disable-pip-version-check install mpi4py
# install Horovod, add other HOROVOD_* environment variables as necessary
HOROVOD_WITH_PYTORCH=1 pip install --no-cache-dir horovod
Collection
- Name: coreyjadams/larcv2-singularity
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/coreyjadams-larcv2-singularity-centos7-cpu-torch-mpi |
collection name | coreyjadams/larcv2-singularity |
branch | centos |
tag | centos7-cpu-torch-mpi |
commit | d21f6c1206513245c1f2314e27826bb87a94fc0c |
version (container hash) | 3a0ee68e4d0e20a81aa097abad31e413 |
build date | 2019-01-08T14:49:56.486Z |
size (MB) | 3170 |
size (bytes) | 1301004319 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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