connor-lab/singularity-recipes:kraken2
$ singularity pull shub://connor-lab/singularity-recipes:kraken2
Singularity Recipe
Bootstrap: docker
From: alpine:3.8
%post
apk update
apk upgrade
apk add git make
apk add bash curl g++ gcc bzip2-dev libc-dev ncurses-dev xz-dev zlib-dev
apk add perl
cd /usr/local/bin
curl -fsSL "https://github.com/DerrickWood/kraken2/archive/v2.0.7-beta.tar.gz" | tar xz
cd kraken2-2.0.7-beta
./install_kraken2.sh /usr/local/bin
%labels
Maintainer m-bull
Version kraken2-v2.0.7
Collection
- Name: connor-lab/singularity-recipes
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/connor-lab-singularity-recipes-kraken2 |
collection name | connor-lab/singularity-recipes |
branch | master |
tag | kraken2 |
commit | 5e322d4c80acb21db9d53649a55a0349c4378009 |
version (container hash) | 6d7a499043db7d63cce4fa48873a8d6c |
build date | 2019-02-07T15:45:22.855Z |
size (MB) | 226 |
size (bytes) | 72134687 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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