connor-lab/singularity-recipes:bbtools
$ singularity pull shub://connor-lab/singularity-recipes:bbtools
Singularity Recipe
Bootstrap: docker
From: alpine:3.8
%post
apk update
apk upgrade
apk add git make
apk add bash curl openjdk8-jre-base zlib-dev
cd /usr/local/bin
curl -fsSL 'https://downloads.sourceforge.net/project/bbmap/BBMap_38.25.tar.gz' | tar -xz
find /usr/local/bin/bbmap -maxdepth 1 -perm /u=x -type f -exec ln -s {} /usr/local/bin/ \;
Collection
- Name: connor-lab/singularity-recipes
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/connor-lab-singularity-recipes-bbtools |
collection name | connor-lab/singularity-recipes |
branch | master |
tag | bbtools |
commit | a43cefa7f62c25a6726a49f5634f285ba75ea6a9 |
version (container hash) | 5b6377dc4333b18e85a4ae00bda536d1 |
build date | 2019-02-07T11:31:15.353Z |
size (MB) | 126 |
size (bytes) | 72605727 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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