chrarnold/Singularity_images:rna_seq_fastqc

$ singularity pull shub://chrarnold/Singularity_images:rna_seq_fastqc

Singularity Recipe

Bootstrap: docker
FROM: continuumio/miniconda3

%labels
  Version v1.0

%help
  Singularity image for the RNA-Seq pipeline (Python 3)



%post

  # Add channels for Bioconda
  /opt/conda/bin/conda config --add channels defaults
  /opt/conda/bin/conda config --add channels bioconda
  /opt/conda/bin/conda config --add channels conda-forge

  # Install the tools
  /opt/conda/bin/conda install --yes fastqc

%environment

%test
   # fastqc --version

Collection


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Metrics

key value
id /containers/chrarnold-Singularity_images-rna_seq_fastqc
collection name chrarnold/Singularity_images
branch master
tag rna_seq_fastqc
commit c159994feb3ccb8cafaac79ab4c312a73e5aa015
version (container hash) d1d42b1ecde63da3cef89fd99da67c0b
build date 2018-12-21T17:01:16.896Z
size (MB) 1333
size (bytes) 701100063
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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