chrarnold/Singularity_images:difftf_conda

$ singularity pull shub://chrarnold/Singularity_images:difftf_conda

Singularity Recipe

Bootstrap: docker
FROM: continuumio/miniconda3

%labels
  Version v1.0

%help
  Singularity image for diffTF ( snakemake bedtools samtools subread via conda)



%post
  /opt/conda/bin/conda config --add channels defaults
  /opt/conda/bin/conda config --add channels bioconda
  /opt/conda/bin/conda config --add channels conda-forge
  /opt/conda/bin/conda install --yes snakemake bedtools samtools subread

%environment

%test
#   snakemake --version
  # bedtools --version
  # samtools --version
  # featureCounts -v

Collection


View on Datalad

Metrics

key value
id /containers/chrarnold-Singularity_images-difftf_conda
collection name chrarnold/Singularity_images
branch master
tag difftf_conda
commit efe809f40dc8602abbefa8f6e1c42c57a298a91d
version (container hash) 6ac680d8ff9577eefaa01be4028baf27
build date 2021-04-16T19:30:22.441Z
size (MB) 2663
size (bytes) 1123541023
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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