chrarnold/Singularity_images:difftf_conda
$ singularity pull shub://chrarnold/Singularity_images:difftf_conda
Singularity Recipe
Bootstrap: docker
FROM: continuumio/miniconda3
%labels
Version v1.0
%help
Singularity image for diffTF ( snakemake bedtools samtools subread via conda)
%post
/opt/conda/bin/conda config --add channels defaults
/opt/conda/bin/conda config --add channels bioconda
/opt/conda/bin/conda config --add channels conda-forge
/opt/conda/bin/conda install --yes snakemake bedtools samtools subread
%environment
%test
# snakemake --version
# bedtools --version
# samtools --version
# featureCounts -v
Collection
- Name: chrarnold/Singularity_images
- License: GNU General Public License v3.0
View on Datalad
Metrics
key | value |
---|---|
id | /containers/chrarnold-Singularity_images-difftf_conda |
collection name | chrarnold/Singularity_images |
branch | master |
tag | difftf_conda |
commit | efe809f40dc8602abbefa8f6e1c42c57a298a91d |
version (container hash) | 6ac680d8ff9577eefaa01be4028baf27 |
build date | 2021-04-16T19:30:22.441Z |
size (MB) | 2663 |
size (bytes) | 1123541023 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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