brucemoran/Singularity:vep-92.1.rattus_norvegicus_merged.centos7
$ singularity pull shub://brucemoran/Singularity:vep-92.1.rattus_norvegicus_merged.centos7
Singularity Recipe
Bootstrap:shub
From:brucemoran/Singularity:vep-92.1.centos7
%help
Container for VEP_92.1 rattus_norvegicus_merged cache
%post
##install cache
cd /usr/local/ensembl-vep
perl ./INSTALL.pl --AUTO ac \
--CACHEDIR "/usr/local/ensembl-vep/cache" \
--SPECIES "rattus_norvegicus_merged" \
--NO_UPDATE \
--NO_HTSLIB \
--PLUGINS "dbNSFP,RefSeqHGVS"
ln -s /usr/local/ensembl-vep/* /usr/local/bin/
Collection
- Name: brucemoran/Singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/brucemoran-Singularity-vep-92.1.rattus_norvegicus_merged.centos7 |
collection name | brucemoran/Singularity |
branch | master |
tag | vep-92.1.rattus_norvegicus_merged.centos7 |
commit | 48ec65f9f707842f1dda7e97bb0bcb4b0205d961 |
version (container hash) | 9f70e837016b5e70b5e0175330ed3ae3 |
build date | 2019-02-13T20:23:56.944Z |
size (MB) | 2260 |
size (bytes) | 1158631455 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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