brucemoran/Singularity:vep-92.1.rattus_norvegicus_merged.centos7

$ singularity pull shub://brucemoran/Singularity:vep-92.1.rattus_norvegicus_merged.centos7

Singularity Recipe

Bootstrap:shub
From:brucemoran/Singularity:vep-92.1.centos7

%help
    Container for VEP_92.1 rattus_norvegicus_merged cache

%post

    ##install cache
    cd /usr/local/ensembl-vep
    perl ./INSTALL.pl --AUTO ac \
                      --CACHEDIR "/usr/local/ensembl-vep/cache" \
                      --SPECIES "rattus_norvegicus_merged" \
                      --NO_UPDATE \
                      --NO_HTSLIB \
                      --PLUGINS "dbNSFP,RefSeqHGVS"

    ln -s /usr/local/ensembl-vep/* /usr/local/bin/

Collection


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Metrics

key value
id /containers/brucemoran-Singularity-vep-92.1.rattus_norvegicus_merged.centos7
collection name brucemoran/Singularity
branch master
tag vep-92.1.rattus_norvegicus_merged.centos7
commit 48ec65f9f707842f1dda7e97bb0bcb4b0205d961
version (container hash) 9f70e837016b5e70b5e0175330ed3ae3
build date 2019-02-13T20:23:56.944Z
size (MB) 2260
size (bytes) 1158631455
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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