bpow/bioinfo-containers:ubuntu

$ singularity pull shub://bpow/bioinfo-containers:ubuntu

Singularity Recipe

BootStrap: debootstrap
OSVersion: bionic
MirrorURL: http://us.archive.ubuntu.com/ubuntu/

%help
	A collection of tools for analysis of high-throughput sequence data

%runscript
    echo "I'm just going to go ahead and drop you into a shell..."
	/bin/bash


%post
    set -eu
    sed -i 's/$/ universe/' /etc/apt/sources.list
    apt-get update
    apt-get -y install --no-install-recommends bwa fastqc samtools bcftools tabix picard-tools
    apt-get clean
	rm -rf /var/lib/apt/lists/*

Collection

• Name: bpow/bioinfo-containers
• License: Apache License 2.0

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