bpow/bioinfo-containers:debian

$ singularity pull shub://bpow/bioinfo-containers:debian

Singularity Recipe

BootStrap: debootstrap
OSVersion: stretch
MirrorURL: http://httpredir.debian.org/debian

%help
	A collection of tools for analysis of high-throughput sequence data

%runscript
    echo "I'm just going to go ahead and drop you into a shell..."
	/bin/bash


%post
    set -eu
    apt-get update
    apt-get -y install --no-install-recommends bwa fastqc samtools bcftools tabix picard-tools
    apt-get clean
	rm -rf /var/lib/apt/lists/*

Collection


View on Datalad

Metrics

key value
id /containers/bpow-bioinfo-containers-debian
collection name bpow/bioinfo-containers
branch master
tag debian
commit 38439e639bfc50c5bfd911909f2f2cc69a4ae615
version (container hash) 4d62e8b475947064668ae80c1b6dabc9
build date 2019-10-03T19:14:20.162Z
size (MB) 523
size (bytes) 187490335
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.