biobox-info/Bowtie2:v2.3.5.1

$ singularity pull shub://biobox-info/Bowtie2:v2.3.5.1

Singularity Recipe

Bootstrap: docker
From: ubuntu:18.04

%environment
PATH=/usr/local/src/bowtie2-2.3.5.1-linux-x86_64:$PATH
export LC_ALL=C.UTF-8
export LANG=C.UTF-8

%post
sed -i "s/archive.ubuntu/de.archive.ubuntu/" /etc/apt/sources.list && \
sed -i "s/security.ubuntu/de.security.ubuntu/" /etc/apt/sources.list && \
apt-get update
apt-get dist-upgrade -y 
apt-get install wget python python3 build-essential unzip git -y 
rm -rf /var/lib/apt/lists/*
mkdir -p /usr/local/src
cd /usr/local/src && \
wget -c https://netix.dl.sourceforge.net/project/bowtie-bio/bowtie2/2.3.5.1/bowtie2-2.3.5.1-linux-x86_64.zip && \
unzip bowtie2-2.3.5.1-linux-x86_64.zip && \
rm bowtie2-2.3.5.1-linux-x86_64.zip

%labels
MAINTAINER BioBox
Version v1.0

Collection


View on Datalad

Metrics

key value
id /containers/biobox-info-Bowtie2-v2.3.5.1
collection name biobox-info/Bowtie2
branch v2.3.5.1
tag v2.3.5.1
commit fc38292e070679e577aa32750636e9e1cfecc43c
version (container hash) 579c01e1bdb077348701efa59d48eca2d6cd6528c68b3e25c8b26fc711da167f
build date 2019-09-16T13:40:31.744Z
size (MB) 185.4453125
size (bytes) 194453504
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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