biobox-info/Bowtie2:latest
$ singularity pull shub://biobox-info/Bowtie2:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:18.04
%environment
PATH=/usr/local/src/bowtie2-2.3.5.1-linux-x86_64:$PATH
export LC_ALL=C.UTF-8
export LANG=C.UTF-8
%post
sed -i "s/archive.ubuntu/de.archive.ubuntu/" /etc/apt/sources.list && \
sed -i "s/security.ubuntu/de.security.ubuntu/" /etc/apt/sources.list && \
apt-get update
apt-get dist-upgrade -y
apt-get install wget python python3 build-essential unzip git -y
rm -rf /var/lib/apt/lists/*
mkdir -p /usr/local/src
cd /usr/local/src && \
wget -c https://netix.dl.sourceforge.net/project/bowtie-bio/bowtie2/2.3.5.1/bowtie2-2.3.5.1-linux-x86_64.zip && \
unzip bowtie2-2.3.5.1-linux-x86_64.zip && \
rm bowtie2-2.3.5.1-linux-x86_64.zip
%labels
MAINTAINER BioBox
Version v1.0
Collection
- Name: biobox-info/Bowtie2
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/biobox-info-Bowtie2-latest |
collection name | biobox-info/Bowtie2 |
branch | master |
tag | latest |
commit | f6e6ebd09749d88c0c6a1b2e318d8abed05306d6 |
version (container hash) | b25c4ff24b77e5168d10915e6686982221cf6d9394404d942e51be9dd6d0db18 |
build date | 2019-09-16T13:14:41.868Z |
size (MB) | 185.4453125 |
size (bytes) | 194453504 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.