bhattlab/MGEfinder-singularity:latest
$ singularity pull shub://bhattlab/MGEfinder-singularity:latest
Singularity Recipe
Bootstrap: docker
From: continuumio/miniconda3
%environment
PATH=/opt/conda/envs/mgefinder/bin:$PATH
export LC_ALL=C.UTF-8
export LANG=C.UTF-8
%post
echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc
echo "source activate mgefinder" > ~/.bashrc
git clone https://github.com/bhattlab/MGEfinder.git
/opt/conda/bin/conda env create -f MGEfinder/env/conda_linux64.yaml
rm -rf MGEfinder
%runscript
exec "$@"
Collection
- Name: bhattlab/MGEfinder-singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/bhattlab-MGEfinder-singularity-latest |
collection name | bhattlab/MGEfinder-singularity |
branch | master |
tag | latest |
commit | 23db425042b7596e50c456e2a723f276e98240e4 |
version (container hash) | 15acba2052e6026ca50c80fff989d97e |
build date | 2021-02-05T10:17:31.756Z |
size (MB) | 2948.0 |
size (bytes) | 1160269855 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.