bballew/NGS_singularity_recipes:svaba
$ singularity pull shub://bballew/NGS_singularity_recipes:svaba
Singularity Recipe
BootStrap: yum
OSVersion: 7
MirrorURL: http://mirror.centos.org/centos-%{OSVERSION}/%{OSVERSION}/os/$basearch/
Include: yum
%labels
AUTHOR BBallew
%setup
mkdir -p ${SINGULARITY_ROOTFS}/input
mkdir -p ${SINGULARITY_ROOTFS}/output
mkdir -p ${SINGULARITY_ROOTFS}/ref
mkdir -p ${SINGULARITY_ROOTFS}/scratch
%environment
PATH=/svaba/bin:$PATH
export PATH
%post
yum -y groupinstall "Development Tools"
yum -y install sudo autoconf automake make cmake gcc wget perl-Data-Dumper zlib zlib-devel tar bzip2 bzip2-devel xz-devel curl-devel openssl-devel ncurses-devel
git clone --recursive https://github.com/walaj/svaba
cd svaba
./configure
make
make install
yum clean all
Collection
- Name: bballew/NGS_singularity_recipes
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/bballew-NGS_singularity_recipes-svaba |
collection name | bballew/NGS_singularity_recipes |
branch | master |
tag | svaba |
commit | 261b0ba21401aa85360fa54efa5ba7f093fdc71a |
version (container hash) | f3ae1487882eda114fe9726af6ffb44e |
build date | 2021-02-26T19:25:10.900Z |
size (MB) | 1088 |
size (bytes) | 348872735 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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