avilab/singularity-cdhit:latest
$ singularity pull shub://avilab/singularity-cdhit:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:latest
%labels
Maintainer tpall
%post
apt-get update && apt-get -y install \
wget \
build-essential \
git \
zlib1g-dev \
ncbi-blast+
git clone https://github.com/tpall/cdhit.git \
&& cd cdhit \
&& git checkout install/psi-cd-hit \
&& make \
&& make install \
&& cd cd-hit-auxtools \
&& make
## Clean up
apt-get clean \
&& rm -rf /var/lib/apt/lists/
cd / \
&& rm -rf cdhit
%environment
export PATH=/usr/local/bin:$PATH
export LC_ALL=C
Collection
- Name: avilab/singularity-cdhit
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/avilab-singularity-cdhit-latest |
collection name | avilab/singularity-cdhit |
branch | master |
tag | latest |
commit | 1908904aa35500faff5d1da470551e9bd740e7d8 |
version (container hash) | d8c121e41c0daf4bb072b4e2ae9478ab |
build date | 2021-03-13T19:52:37.693Z |
size (MB) | 418.0 |
size (bytes) | 137162783 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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