avilab/singularity-cdhit:latest

$ singularity pull shub://avilab/singularity-cdhit:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:latest

%labels
  Maintainer tpall

%post
apt-get update && apt-get -y install \
  wget \
  build-essential \
  git \
  zlib1g-dev \
  ncbi-blast+

git clone https://github.com/tpall/cdhit.git \
  && cd cdhit \
  && git checkout install/psi-cd-hit \
  && make \
  && make install \
  && cd cd-hit-auxtools \
  && make

## Clean up
apt-get clean \
  && rm -rf /var/lib/apt/lists/ 
cd / \
  && rm -rf cdhit

%environment
  export PATH=/usr/local/bin:$PATH
  export LC_ALL=C

Collection


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Metrics

key value
id /containers/avilab-singularity-cdhit-latest
collection name avilab/singularity-cdhit
branch master
tag latest
commit 1908904aa35500faff5d1da470551e9bd740e7d8
version (container hash) d8c121e41c0daf4bb072b4e2ae9478ab
build date 2021-03-13T19:52:37.693Z
size (MB) 418.0
size (bytes) 137162783
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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