aseetharam/necat:latest

$ singularity pull shub://aseetharam/necat:latest

Singularity Recipe

Bootstrap: docker
From: ubuntu:16.04

%environment
   export PATH=$PATH:/opt/NECAT/Linux-amd64/bin

%labels
   Author Arun Seetharam
   Version v1
   Maintainer arnstrm@iastate.edu

%help
   This is a container for the NECAT

%test
#   which necat.pl
#   which pigz
#   which ctgcns

%post
   apt-get update
   apt-get install -y build-essential wget curl git autoconf
   apt-get install -y gcc g++ make
   apt-get install -y zlib1g-dev libgomp1 libgomp1 libpam-systemd-
   apt-get install -y libcurl4-gnutls-dev libxml2-dev libssl-dev libbz2-dev
   apt-get install -y gfortran
   apt-get install -y perl python3 python3-pip 

# instll necat
   cd opt/
   git clone https://github.com/xiaochuanle/NECAT.git
   cd NECAT/src
   make
   cd ../Linux-amd64/bin

Collection


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Metrics

key value
id /containers/aseetharam-necat-latest
collection name aseetharam/necat
branch main
tag latest
commit e99991d431e64767a7eab1c64afcd1974cd3e312
version (container hash) 55a893f9b82e2b48bf69cff492f0f9687a50bc05e9d83a7a532ace0bbef9f335
build date 2021-03-02T03:37:53.349Z
size (MB) 236.3203125
size (bytes) 247799808
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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