aseetharam/necat:latest
$ singularity pull shub://aseetharam/necat:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:16.04
%environment
export PATH=$PATH:/opt/NECAT/Linux-amd64/bin
%labels
Author Arun Seetharam
Version v1
Maintainer arnstrm@iastate.edu
%help
This is a container for the NECAT
%test
# which necat.pl
# which pigz
# which ctgcns
%post
apt-get update
apt-get install -y build-essential wget curl git autoconf
apt-get install -y gcc g++ make
apt-get install -y zlib1g-dev libgomp1 libgomp1 libpam-systemd-
apt-get install -y libcurl4-gnutls-dev libxml2-dev libssl-dev libbz2-dev
apt-get install -y gfortran
apt-get install -y perl python3 python3-pip
# instll necat
cd opt/
git clone https://github.com/xiaochuanle/NECAT.git
cd NECAT/src
make
cd ../Linux-amd64/bin
Collection
- Name: aseetharam/necat
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/aseetharam-necat-latest |
collection name | aseetharam/necat |
branch | main |
tag | latest |
commit | e99991d431e64767a7eab1c64afcd1974cd3e312 |
version (container hash) | 55a893f9b82e2b48bf69cff492f0f9687a50bc05e9d83a7a532ace0bbef9f335 |
build date | 2021-03-02T03:37:53.349Z |
size (MB) | 236.3203125 |
size (bytes) | 247799808 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.