aseetharam/class2:latest
$ singularity pull shub://aseetharam/class2:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:20.04
%environment
export PATH=$PATH:/opt/CLASS-2.1.7
%labels
MAINTAINER Arun Seetharam
EMAIL arnstrm@iastate.edu
%post
apt-get update
apt-get install -y build-essential wget curl git autoconf automake
apt-get install -y gcc g++ make
apt-get install -y perl zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev libncurses5-dev
cd /opt
wget https://github.com/samtools/samtools/releases/download/1.10/samtools-1.10.tar.bz2
tar xf samtools-1.10.tar.bz2
cd samtools-1.10
./configure
make
make install
cd /opt
wget https://downloads.sourceforge.net/project/splicebox/CLASS-2.1.7.tar.gz
tar xf CLASS-2.1.7.tar.gz
cd CLASS-2.1.7
sh build.sh
make
# make install
Collection
- Name: aseetharam/class2
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/aseetharam-class2-latest |
collection name | aseetharam/class2 |
branch | master |
tag | latest |
commit | a34e1371cfae90c0a89a74904fe34920c05b175b |
version (container hash) | fdce6bc0e4563b065630c094f43c8f7a |
build date | 2020-09-06T19:56:38.419Z |
size (MB) | 523.0 |
size (bytes) | 179576863 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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