arcsUVA/anaconda:cuda9.0-cudnn7.4-py3.6

$ singularity pull shub://arcsUVA/anaconda:cuda9.0-cudnn7.4-py3.6

Singularity Recipe

BootStrap: docker
From: nvidia/cuda:9.0-devel-ubuntu16.04


%post
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# this will install all necessary packages and prepare the container
    CUDA_MAJVERSION=9
    CUDA_MINVERSION=0
    CUDA_VERSION=${CUDA_MAJVERSION}.${CUDA_MINVERSION}
    CUDNN_VERSION=7.4.1.5
    apt-get -y update --fix-missing

    # install cuDNN and accessories
    apt-get install -y --no-install-recommends \
        build-essential \
        cuda-command-line-tools-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        cuda-cublas-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        cuda-cufft-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        cuda-curand-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        cuda-cusolver-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        cuda-cusparse-${CUDA_MAJVERSION}-${CUDA_MINVERSION} \
        libcudnn7=${CUDNN_VERSION}-1+cuda${CUDA_VERSION} \
        libfreetype6-dev \
        libhdf5-serial-dev \
        libpng12-dev \
        libzmq3-dev \
        pkg-config \
        software-properties-common \
        unzip

    # install other tools and dependencies
    apt-get -y install --allow-downgrades --no-install-recommends \
        dbus \
        wget \
        git \
        mercurial \
        subversion \
        vim \
        nano \
        cmake \
        bzip2 \
        ca-certificates \
        libglib2.0-0 \
        libxext6 \
        libsm6 \
        libxrender1 \
        libboost-all-dev

    apt-get clean
    rm -rf /var/lib/apt/lists/*

    rm /etc/machine-id
    dbus-uuidgen --ensure=/etc/machine-id

    wget --quiet https://repo.continuum.io/archive/Anaconda3-5.2.0-Linux-x86_64.sh -O ~/anaconda.sh
    /bin/bash ~/anaconda.sh -b -p /opt/conda
    rm ~/anaconda.sh
    export PATH=/opt/conda/bin:$PATH

    conda update conda pandas
    conda install \
        pyqt=5.6.0 \
        msgpack-python
        spyder=3.3.2 \
        qtconsole=4.3.1 \
        qtpy=1.5.2 
    pip install --upgrade \
        pip

%runscript
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# this text code will run whenever the container
# is called as an executable or with `singularity run`
exec python $@


%help
Applications and libraries provided by this container:
    * Anaconda 5.2.0, Python 3.6
    * CUDA 9.0
    * CuDNN 7.4.1.5


%environment
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# This sets global environment variables for anything run within the container
    export CUDA_HOME="/usr/local/cuda"
    export CPATH="$CUDA_HOME/include:$CPATH"
    export LD_LIBRARY_PATH="$CUDA_HOME/lib64:$CUDA_HOME/extras/CUPTI/lib64:$LD_LIBRARY_PATH"
    export PATH="$CUDA_HOME/bin:$PATH"

    export PATH="/opt/conda/bin:$PATH"
    unset CONDA_DEFAULT_ENV
    export ANACONDA_HOME=/opt/conda

Collection

• Name: arcsUVA/anaconda
• License: None

Metrics

Feedback

Was this page helpful?

Glad to hear it! Please tell us how we can improve.

Sorry to hear that. Please tell us how we can improve.