aminnayebi/Py2.7Torch-Container:cen7py2-7

$ singularity pull shub://aminnayebi/Py2.7Torch-Container:cen7py2-7

Singularity Recipe

BootStrap: yum
OSVersion: 7
MirrorURL: http://mirror.centos.org/centos-%{OSVERSION}/%{OSVERSION}/os/$basearch/
Include: yum wget
 
%setup
    # commands to be executed on host outside container during bootstrap
 
%post
    # commands to be executed inside container during bootstrap
 
    # yum needs some tlc to work properly in container
    RELEASEVER=7
    ARCH=x86_64
    echo $RELEASEVER > /etc/yum/vars/releasever
    echo $ARCH > /etc/yum/vars/arch
    wget https://dl.fedoraproject.org/pub/epel/7/x86_64/Packages/e/epel-release-7-11.noarch.rpm
    rpm -ivh --nodeps epel-release-7-11.noarch.rpm
    # yum -d 10 check-update  # this line caused problems in testing
 
    # install other needed packages
    yum -y install man which tar gzip vim-minimal perl python python-dev python-pip util-linux
 
    # create bind points for NIH HPC environment
    mkdir -p /extra /rsgrps
 
    # download and run NIH HPC cuda for singularity installer
    wget ftp://helix.nih.gov/CUDA/cuda4singularity
    chmod 755 cuda4singularity
    ./cuda4singularity
    rm cuda4singularity
 
    # install tensorflow
    #pip install --upgrade pip
    #pip install --upgrade https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow-0.10.0-cp27-none-linux_x86_64.whl
 
%runscript
    # commands to be executed when the container runs
 
%test
    # commands to be executed within container at close of bootstrap process

Collection

• Name: aminnayebi/Py2.7Torch-Container
• License: None

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