TomHarrop/variant-utils:easysfs_c2b26c5

$ singularity pull shub://TomHarrop/variant-utils:easysfs_c2b26c5

Singularity Recipe

Bootstrap: docker
From: python:2.7.18-buster

%help
    Container for easysfs c2b26c5

%labels
    VERSION "easysfs c2b26c5"

%environment
    export PATH="/easysfs:${PATH}"
    export LC_ALL=C

%post
    export DEBIAN_FRONTEND=noninteractive
    export LC_ALL=C

    apt-get update
    apt-get install -y \
        build-essential

    /usr/local/bin/pip install \
        matplotlib==2.2.5 \
        numpy==1.16.6 \
        pandas==0.24.2 \
        scipy==1.2.3

    /usr/local/bin/pip install \
        dadi==2.0.5

    git clone \
        https://github.com/isaacovercast/easySFS.git \
        /easysfs
    (
    cd /easysfs || exit 1
    git checkout -f c2b26c5
    git submodule update --init --recursive
    chmod 755 easySFS.py
    )


%runscript
    exec /easysfs/easySFS.py "$@"

Collection


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Metrics

key value
id /containers/TomHarrop-variant-utils-easysfs_c2b26c5
collection name TomHarrop/variant-utils
branch master
tag easysfs_c2b26c5
commit d4b8b1b9b4e5913389382e1d34960d1f44af5961
version (container hash) f0b1c194c1370d4deeb893f3a71433231469dc115833bdbc35e2ee43096e0c82
build date 2020-04-30T23:22:14.432Z
size (MB) 449.26171875
size (bytes) 471085056
SIF Download URL (please use pull with shub://)
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