TomHarrop/singularity-containers:vcflib_1.0.0-rc2

$ singularity pull shub://TomHarrop/singularity-containers:vcflib_1.0.0-rc2

Singularity Recipe

Bootstrap: docker
From: ubuntu:18.10

%help
    Container for vcflib 1.0.0-rc2

%labels
    VERSION "vcflib 1.0.0-rc2"

%post
    # packages
    apt update
    apt install -y \
        build-essential \
        git \
        libbz2-dev \
        liblzma-dev \
        wget \
        zlib1g-dev

    # download vcflib
    git clone \
        https://github.com/vcflib/vcflib.git
    cd vcflib || exit 1
    git checkout tags/v1.0.0-rc2
    git submodule update --init --recursive
    make openmp

%environment
    export PATH="${PATH}:/vcflib/bin"

Collection


View on Datalad

Metrics

key value
id /containers/TomHarrop-singularity-containers-vcflib_1.0.0-rc2
collection name TomHarrop/singularity-containers
branch master
tag vcflib_1.0.0-rc2
commit a2f174a40f445103f3fe20d0866ee2a47e397a22
version (container hash) e1ea7a39e213915ffc5ef71b39f8d896
build date 2019-11-25T00:54:28.828Z
size (MB) 733
size (bytes) 291831839
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.