TomHarrop/singularity-containers:star_2.7.0c

$ singularity pull shub://TomHarrop/singularity-containers:star_2.7.0c

Singularity Recipe

Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: build-essential wget zlib1g-dev

%help

    Container for STAR 2.7.0c
    https://github.com/alexdobin/STAR/releases

%labels

    MAINTAINER "Tom Harrop (twharrop@gmail.com)"
    VERSION "STAR 2.7.0c"

%runscript

    exec /usr/local/bin/STAR "$@"

%post

    # install STAR
    wget -O "star.tar.gz" \
        --no-check-certificate \
        https://github.com/alexdobin/STAR/archive/2.7.0c.tar.gz
    mkdir star
    tar -zxf star.tar.gz \
        -C star \
        --strip-components 1
    cd star/source || exit 1
    make
    cp STAR /usr/local/bin
    cd ../../ || exit 1
    rm -rf star.tar.gz star

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-star_2.7.0c
collection name TomHarrop/singularity-containers
branch master
tag star_2.7.0c
commit a1241a6b28cba026d4d237bbf1b0a1faa91ac8ec
version (container hash) 142e413ffee6b36329e9060bf6a2c70e
build date 2020-04-29T23:00:39.275Z
size (MB) 354
size (bytes) 161517599
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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