TomHarrop/singularity-containers:star_2.6.0c

$ singularity pull shub://TomHarrop/singularity-containers:star_2.6.0c

Singularity Recipe

Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: build-essential wget zlib1g-dev

%help

    Container for STAR 2.6.0c
    https://github.com/alexdobin/STAR/releases

%labels

    MAINTAINER "Tom Harrop (twharrop@gmail.com)"
    VERSION "STAR 2.6.0c"

%runscript

    exec /usr/local/bin/STAR "$@"

%post

    # install STAR
    wget -O "star.tar.gz" \
        --no-check-certificate \
        https://github.com/alexdobin/STAR/archive/2.6.0c.tar.gz
    mkdir star
    tar -zxf star.tar.gz \
        -C star \
        --strip-components 1
    cd star/source || exit 1
    make
    cp STAR /usr/local/bin
    cd ../../ || exit 1
    rm -rf star.tar.gz star

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-star_2.6.0c
collection name TomHarrop/singularity-containers
branch master
tag star_2.6.0c
commit 2dde121aba48dd0ae0f988dce174c71ce2060520
version (container hash) eaa90a258fdb26b6b0ce7d07246ffe2c
build date 2018-09-10T22:18:08.541Z
size (MB) 353
size (bytes) 161460255
SIF Download URL (please use pull with shub://)
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