TomHarrop/singularity-containers:stacks_2.0b

$ singularity pull shub://TomHarrop/singularity-containers:stacks_2.0b

Singularity Recipe

Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: build-essential language-pack-en wget zlib1g-dev

%help

    Container for stacks 2.0b
    http://catchenlab.life.illinois.edu/stacks

%labels

    MAINTAINER "Tom Harrop"
    VERSION "stacks 2.0b"

%post

    # install stacks
    wget -O "stacks.tar.gz" \
        http://catchenlab.life.illinois.edu/stacks/source/stacks-2.0b.tar.gz
    mkdir stacks-install
    tar -zxf stacks.tar.gz \
        -C stacks-install \
        --strip-components 1
    cd stacks-install || exit 1
    ./configure \
    && make \
    && make install
    cd ~ || exit 1
    rm -rf stacks-install stacks.tar.gz

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-stacks_2.0b
collection name TomHarrop/singularity-containers
branch master
tag stacks_2.0b
commit 72e9da62d9b917f17bf8416229fee6e6ad5a6248
version (container hash) 099f0c7d8c8ff2baf7ad763ad7bcd17b
build date 2019-09-18T01:24:06.358Z
size (MB) 724
size (bytes) 240799775
SIF Download URL (please use pull with shub://)
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