TomHarrop/singularity-containers:py3.7.3_biopython1.73

$ singularity pull shub://TomHarrop/singularity-containers:py3.7.3_biopython1.73

Singularity Recipe

Bootstrap: docker
From: ubuntu:19.04

%help
    Container for testing biopython index_db()
    https://github.com/tomharrop/racon-chunks

    Python 3.7.3 with biopython 1.73

%labels
    MAINTAINER "Tom Harrop"

%runscript
    exec /usr/bin/python3 "$@"

%post
    # dependencies
    apt-get update
    apt-get install -y \
        python3-pip

    # python + biopython
    /usr/bin/pip3 install --upgrade pip
    /usr/local/bin/pip3 install \
        biopython==1.73
    update-alternatives \
        --install /usr/bin/python \
        python \
        /usr/bin/python3 \
        1

Collection


View on Datalad

Metrics

key value
id /containers/TomHarrop-singularity-containers-py3.7.3_biopython1.73
collection name TomHarrop/singularity-containers
branch master
tag py3.7.3_biopython1.73
commit 368c865905bac2d760a5f395a488540b93ae3e40
version (container hash) 9281d838c5984dd35f671bf99a3f2885
build date 2019-05-02T20:56:07.752Z
size (MB) 625
size (bytes) 253968415
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.