TomHarrop/singularity-containers:plink_1.09beta5
$ singularity pull shub://TomHarrop/singularity-containers:plink_1.09beta5
Singularity Recipe
Bootstrap: docker
From: ubuntu:18.04
%help
plink 1.09 beta 5
http://www.cog-genomics.org/plink/1.9/
%labels
MAINTAINER "Tom Harrop"
VERSION "plink 1.09 beta 5"
%post
# install dependencies
apt-get update
apt-get install -y \
build-essential \
curl \
language-pack-en \
libatlas-base-dev \
libblas-dev \
wget
# install plink
wget -O "plink.tar.gz" \
--no-check-certificate \
https://github.com/chrchang/plink-ng/archive/b15c19f.tar.gz
mkdir plink
tar -zxf plink.tar.gz \
-C plink \
--strip-components 1
cd plink/1.9 || exit 1
./plink_first_compile
mv plink /usr/local/bin
cd ../../ || exit 1
rm -rf plink plink.tar.gz
%runscript
exec /usr/bin/plink "$@"
Collection
- Name: TomHarrop/singularity-containers
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/TomHarrop-singularity-containers-plink_1.09beta5 |
collection name | TomHarrop/singularity-containers |
branch | master |
tag | plink_1.09beta5 |
commit | 98c69c859b563f91cc18264d5ed6bc510a461c40 |
version (container hash) | 43028012f29a70de72e266ce4e6621f9 |
build date | 2018-09-18T03:28:17.926Z |
size (MB) | 401 |
size (bytes) | 147279903 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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