TomHarrop/singularity-containers:plink_1.09beta5

$ singularity pull shub://TomHarrop/singularity-containers:plink_1.09beta5

Singularity Recipe

Bootstrap: docker
From: ubuntu:18.04

%help

    plink 1.09 beta 5
    http://www.cog-genomics.org/plink/1.9/

%labels

    MAINTAINER "Tom Harrop"
    VERSION "plink 1.09 beta 5"

%post

    # install dependencies
    apt-get update
    apt-get install -y \
        build-essential \
        curl \
        language-pack-en \
        libatlas-base-dev \
        libblas-dev \
        wget

    # install plink
    wget -O "plink.tar.gz" \
        --no-check-certificate \
        https://github.com/chrchang/plink-ng/archive/b15c19f.tar.gz
    mkdir plink
    tar -zxf plink.tar.gz \
        -C plink \
        --strip-components 1

    cd plink/1.9 || exit 1
    ./plink_first_compile

    mv plink /usr/local/bin

    cd ../../ || exit 1
    rm -rf plink plink.tar.gz

%runscript

    exec /usr/bin/plink "$@"

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-plink_1.09beta5
collection name TomHarrop/singularity-containers
branch master
tag plink_1.09beta5
commit 98c69c859b563f91cc18264d5ed6bc510a461c40
version (container hash) 43028012f29a70de72e266ce4e6621f9
build date 2018-09-18T03:28:17.926Z
size (MB) 401
size (bytes) 147279903
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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