TomHarrop/singularity-containers:mummer_4.0.0beta2

$ singularity pull shub://TomHarrop/singularity-containers:mummer_4.0.0beta2

Singularity Recipe

Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: build-essential language-pack-en software-properties-common wget

%help

    Container for mummer 4.0.0beta2
    https://github.com/mummer4/mummer/releases

%labels

    MAINTAINER "Tom Harrop"
    VERSION "mummer 4.0.0beta2"

%runscript

    exec mummer "$@"

%post

    # add apt repos
    add-apt-repository \
        "deb http://archive.ubuntu.com/ubuntu bionic main universe restricted multiverse"
    add-apt-repository \
        "deb http://archive.canonical.com/ubuntu bionic partner"
    apt update

    # install apt packages
    apt install -y \
        fig2dev \
        gnuplot \
        xfig

    # build mummer
    wget -O "mummer.tar.gz" \
        --no-check-certificate \
        https://github.com/mummer4/mummer/releases/download/v4.0.0beta2/mummer-4.0.0beta2.tar.gz
    mkdir mummer-install
    tar -zxf mummer.tar.gz \
        -C mummer-install \
        --strip-components 1
    cd mummer-install || exit 1
    ./configure && make && make install
    cd .. || exit 1
    rm -rf mummer.tar.gz mummer-install

    # rebuild libraries
    ldconfig

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-mummer_4.0.0beta2
collection name TomHarrop/singularity-containers
branch master
tag mummer_4.0.0beta2
commit 7715562a737b38b78f43a745654e5c6d6b9a9c6e
version (container hash) 648fb9018fdc44febf1361010f2aab46
build date 2020-06-04T02:45:33.509Z
size (MB) 953
size (bytes) 368291871
SIF Download URL (please use pull with shub://)
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