TomHarrop/singularity-containers:minimap2_2.11r797

$ singularity pull shub://TomHarrop/singularity-containers:minimap2_2.11r797

Singularity Recipe

Bootstrap: docker
From: ubuntu:18.04

%help

    minimap2 2.11 (r797)
    
%labels

    MAINTAINER "Tom Harrop (twharrop@gmail.com)"
    VERSION "minimap2 2.11 (r797)"

%post

    # install dependencies
    apt-get update
    apt-get install -y \
        build-essential wget zlib1g-dev

    # install minimap2
    wget -O "minimap2.tar.gz" \
        --no-check-certificate \
        https://github.com/lh3/minimap2/archive/v2.11.tar.gz
    mkdir minimap2
    tar -zxf minimap2.tar.gz \
        -C minimap2 \
        --strip-components 1

    cd minimap2 || exit 1
    make
    mv minimap2 /usr/local/bin/

    cd .. || exit 1
    rm -rf minimap2 minimap2.tar.gz

%runscript

    exec /usr/local/bin/minimap2 "$@"

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-minimap2_2.11r797
collection name TomHarrop/singularity-containers
branch master
tag minimap2_2.11r797
commit 48dac27ef65390e21b9c798fc200c02a3eca4968
version (container hash) 6cb68f34c64c0d06289eb01965b9d679
build date 2021-01-04T23:41:17.752Z
size (MB) 327
size (bytes) 124977183
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
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