TomHarrop/singularity-containers:hmmer_3.2.1

$ singularity pull shub://TomHarrop/singularity-containers:hmmer_3.2.1

Singularity Recipe

Bootstrap: docker
From: ubuntu:18.04

%help

    HMMER 3.2.1
    http://www.hmmer.org/

%labels

    MAINTAINER "Tom Harrop"
    VERSION "HMMER 3.2.1"

%post

    # dependencies
    apt-get update
    apt-get install -y \
        build-essential \
        wget 

    # install
    wget -O "hmmer.tar.gz" \
        --no-check-certificate \
        "http://eddylab.org/software/hmmer/hmmer-3.2.1.tar.gz"
    mkdir hmmer
    tar -zxf hmmer.tar.gz \
        -C hmmer \
        --strip-components 1
    cd hmmer || exit 1
    ./configure
    make
    make install
    cd .. || exit 1
    rm -rf hmmer hmmer.tar.gz

%runscript

    exec /usr/local/bin/hmmsearch "$@"

Collection


View on Datalad

Metrics

key value
id /containers/TomHarrop-singularity-containers-hmmer_3.2.1
collection name TomHarrop/singularity-containers
branch master
tag hmmer_3.2.1
commit 849809b1260634e5bed2b66efe5f3871b97b0378
version (container hash) 5e9dc82d80500447dd945feb631cd9f3
build date 2020-12-17T21:23:53.045Z
size (MB) 340
size (bytes) 131424287
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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