TomHarrop/singularity-containers:bbmap_38.00

$ singularity pull shub://TomHarrop/singularity-containers:bbmap_38.00

Singularity Recipe

Bootstrap: debootstrap
OSVersion: bionic
MirrorURL: http://archive.ubuntu.com/ubuntu/
Include: default-jre wget

%help

    Container for BBMap 38.00
    https://jgi.doe.gov/data-and-tools/bbtools/

%labels

    MAINTAINER "Tom Harrop"
    VERSION "BBMap 38.00"

%post

    wget -O "bbmap.tar.gz" \
        "https://sourceforge.net/projects/bbmap/files/BBMap_38.00.tar.gz"
    mkdir bbmap-install
    tar -zxf bbmap.tar.gz \
        -C bbmap-install \
        --strip-components 1
    cp -r bbmap-install/resources/* /
    cp -r bbmap-install/* /usr/local/bin/
    rm -rf bbmap.tar.gz bbmap-install

Collection


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Metrics

key value
id /containers/TomHarrop-singularity-containers-bbmap_38.00
collection name TomHarrop/singularity-containers
branch master
tag bbmap_38.00
commit 5e102f3a75454795ffbb73c487c38430aa0caca5
version (container hash) a773baa8cc025cc5b5cbee20e507fef7
build date 2021-03-15T21:25:56.436Z
size (MB) 637
size (bytes) 295428127
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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