TomHarrop/seq-utils:pysam_0.15.3

$ singularity pull shub://TomHarrop/seq-utils:pysam_0.15.3

Singularity Recipe

Bootstrap: docker
From: python:3.7.5-buster

%help
    pysam 0.15.3
    https://pysam.readthedocs.io

%labels
    MAINTAINER "Tom Harrop"
    VERSION "pysam 0.15.3"

%post
    # install dependencies
    apt-get update
    apt-get install -y \
        build-essential \
        libcrypto++-dev

    # install porechop 
    /usr/local/bin/pip3 install \
        pysam==0.15.3

%runscript
    exec /usr/local/bin/python3 "$@"

Collection


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Metrics

key value
id /containers/TomHarrop-seq-utils-pysam_0.15.3
collection name TomHarrop/seq-utils
branch master
tag pysam_0.15.3
commit eb6e9de51b8f2178675729a29fc96201cf4edb17
version (container hash) 973c3acc1e56e609ac9b594151ddff1a3591b8794a1382221bc835289e66242f
build date 2019-12-16T20:45:47.875Z
size (MB) 352.53125
size (bytes) 369655808
SIF Download URL (please use pull with shub://)
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