TomHarrop/funannotate-singularity:repeatmasker_4.0.9p2

$ singularity pull shub://TomHarrop/funannotate-singularity:repeatmasker_4.0.9p2

Singularity Recipe

Bootstrap: docker
From: tomharrop/funannotate-singularity:repeatmasker-4.0.9p2

%runscript
    exec /usr/local/RepeatMasker/RepeatMasker "$@"

%post
    export DEBIAN_FRONTEND=noninteractive

    # configure repeatmasker
    apt-get install -y expect
    (
        cd /usr/local/RepeatMasker || exit 1
        expect -c "
        spawn perl configure
        expect \"Enter path *\"
        send \"\n\"
        expect \"Enter Selection*\"
        send \"5\n\"
        interact"
    )

Collection


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Metrics

key value
id /containers/TomHarrop-funannotate-singularity-repeatmasker_4.0.9p2
collection name TomHarrop/funannotate-singularity
branch master
tag repeatmasker_4.0.9p2
commit 04f73656bdbbaca3cddffc9d49d8205d462862b3
version (container hash) 92c38e0aa6283404d184c553b35bbbeae2cb711da2b1d9514b157716b6aa0dc9
build date 2021-01-18T00:25:23.383Z
size (MB) 866.6015625
size (bytes) 908697600
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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