TheRevanchist/sing-pytorch:latest

$ singularity pull shub://TheRevanchist/sing-pytorch:latest

Singularity Recipe

Bootstrap: docker
From: shreyaskamathkm/deeplearning


%environment
  # use bash as default shell
  SHELL=/bin/bash
  export SHELL
  PATH="/opt/conda/bin:$PATH"
  export PATH


%setup
  # runs on host - the path to the image is $SINGULARITY_ROOTFS

%post
  # post-setup script
  apt update && apt install -y libsm6 libxext6
  apt-get install -y libxrender-dev
  # load environment variables
  . /environment

  # make environment file executable
  mkdir /data
  chmod +x /environment

  # default mount paths, files
  touch /usr/bin/nvidia-smi
  
  # user requests 
  /opt/conda/bin/conda install -c anaconda python=3.6
  /opt/conda/bin/conda install -c conda-forge onnx spectrum nibabel
  /opt/conda/bin/conda update -y --all
  /opt/conda/bin/conda install pytorch torchvision cudatoolkit=10.0 -c pytorch
  /opt/conda/bin/conda clean -ya
  
  pip install --upgrade pip
  pip install natsort
  pip install opencv-python
  pip install opencv-contrib-python
  pip install deepdish
  pip install albumentations
  pip install PyContracts
  pip install easydict
  pip install opencv-python
  pip install numpy scipy scikit-learn
  pip install Cython

  
%runscript
  # executes with the singularity run command
  # delete this section to use existing docker ENTRYPOINT command

%test
  # test that script is a success

Collection

• Name: TheRevanchist/sing-pytorch
• License: None

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